BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H10SP1|AL425041
(1031 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1256 827 0.0
3x_Contig1475 149 9e-36
>3x_Contig1256
Length = 6519
Score = 827 bits (416), Expect = 0.0
Identities = 454/466 (97%), Gaps = 3/466 (0%)
Strand = Plus / Plus
Query: 569 ggcaaggtactcttgtactgagaagaaatcacggggtacgaagtacgccangnagatcaa 628
|||||||||||||||||||||||||||||||||||||||||||||| | | | |||||||
Sbjct: 1 ggcaaggtactcttgtactgagaagaaatcacggggtacgaagtaccctatgtagatcaa 60
Query: 629 cgtgcaatagaagaacactcactgcacgcgcgctgcs-ttmtngntgaggcctatctgga 687
|||||||||||||||||||||||||||||||||||| || | | |||||||||||||||
Sbjct: 61 cgtgcaatagaagaacactcactgcacgcgcgctgcgcttcttgttgaggcctatctgga 120
Query: 688 tttgcctccttgtaaattatgtcattgcgc-gtacatacgggccaaactccgcaccatgt 746
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 tttgcctccttgtaaattatgtcattgcgcagtacatacgggccaaactccgcaccatgt 180
Query: 747 gactgcaatacaggtattcgttctggaccaaaatcttctcgaagaagaaagagttgggcc 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gactgcaatacaggtattcgttctggaccaaaatcttctcgaagaagaaagagttgggcc 240
Query: 807 cagatctttcgcgttacctttccattcccatttccccactcccgtttactgcgtgtattt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagatctttcgcgttacctttccattcccatttccccactcccgtttactgcgtgtattt 300
Query: 867 cttccgaaatctgaaatcattgattacatcactacttctcgtttttg-aaaaaaatacaa 925
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 cttccgaaatctgaaatcattgattacatcactacttctcgtttttgaaaaaaaatacaa 360
Query: 926 cgaattcaatacaatttgctcacccggatatcagcaagccattgaaccgtcctagatttg 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgaattcaatacaatttgctcacccggatatcagcaagccattgaaccgtcctagatttg 420
Query: 986 ttgctatggcgggtcagggacaaagcggtgamctgttttcgagaat 1031
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 421 ttgctatggcgggtcagggacaaagcggtgacctgttttcgagaat 466
>3x_Contig1475
Length = 10676
Score = 149 bits (75), Expect = 9e-36
Identities = 84/87 (96%)
Strand = Plus / Minus
Query: 1 gatctgattctgattctgattctgcctggatatatcaaacatatatgcaagcattcagga 60
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 111 gatctgattctgattctgattctgcctggatatatcaaaaaaatatgcaagcattcagga 52
Query: 61 tctaaaacaatccgaaataacaccgat 87
||||||||||||||| |||||||||||
Sbjct: 51 tctaaaacaatccgagataacaccgat 25
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,173
Number of Sequences: 1807
Number of extensions: 18173
Number of successful extensions: 1146
Number of sequences better than 1.0e-20: 2
length of query: 1031
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1015
effective length of database: 10,329,639
effective search space: 10484583585
effective search space used: 10484583585
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)